Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000002033Shisa like 1b. (193 aa)    
Predicted Functional Partners:
ENSACIP00000021729
Peptidyl-prolyl cis-trans isomerase.
      
 0.745
ENSACIP00000016359
NHS-like 2.
      
 0.744
ENSACIP00000025993
Cysteine/tyrosine-rich 1.
      
 0.689
ENSACIP00000029691
VOPP1 WW domain binding protein.
      
 0.638
ENSACIP00000002712
LLP homolog, long-term synaptic facilitation factor.
      
 0.636
ENSACIP00000025846
Shisa family member 3.
      
 0.628
ENSACIP00000029747
Excision repair cross-complementation group 6.
      
 0.574
ENSACIP00000002888
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
      
 0.535
ENSACIP00000004352
Family with sequence similarity 3 member C.
      
 0.535
ENSACIP00000015717
Uncharacterized protein.
      
 0.535
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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