Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000002091Rab interacting lysosomal protein-like 2. (189 aa)    
Predicted Functional Partners:
ENSACIP00000021310
Uncharacterized protein.
      
 0.894
ENSACIP00000030748
RAB10, member RAS oncogene family.
    
 
 0.860
ENSACIP00000002133
Multiple EGF-like-domains 8.
   
 
 0.833
ENSACIP00000003989
Uncharacterized protein.
   
 
 0.833
ENSACIP00000010407
RAB8A, member RAS oncogene family.
   
 
 0.833
ENSACIP00000005691
Uncharacterized protein.
    
 
 0.831
ENSACIP00000010977
RAB13, member RAS oncogene family.
    
 
 0.831
ENSACIP00000012010
RAB15, member RAS oncogene family.
    
 
 0.831
ENSACIP00000013660
RAB15, member RAS oncogene family.
    
 
 0.831
ENSACIP00000018300
RAB40B, member RAS oncogene family.
    
 
 0.743
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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