Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000002124Rho guanine nucleotide exchange factor (GEF) 40. (1567 aa)    
Predicted Functional Partners:
ENSACIP00000002210
Bloodthirsty-related gene family, member 12.
      
 0.642
ENSACIP00000020772
Rho guanine nucleotide exchange factor (GEF) 10.
     
 0.629
ENSACIP00000000134
Uncharacterized protein.
     
 0.625
ENSACIP00000000135
Pleckstrin homology domain containing, family G (with RhoGef domain) member 7.
     
 0.625
ENSACIP00000026307
Rho guanine nucleotide exchange factor (GEF) 38.
     
 0.617
ENSACIP00000026318
Uncharacterized protein.
     
 0.617
ENSACIP00000005667
Transglutaminase 1 like 1.
    
  0.605
ENSACIP00000006725
Transglutaminase 2, like.
    
  0.605
ENSACIP00000006890
TGc domain-containing protein.
    
  0.605
ENSACIP00000012745
Coagulation factor XIII, A1 polypeptide b.
    
  0.605
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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