Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSACIP00000002131Uncharacterized protein; Belongs to the DEAD box helicase family. (629 aa)    
Predicted Functional Partners:
ENSACIP00000024954
Drosha ribonuclease III.
  
 0.975
ENSACIP00000021220
DEAH (Asp-Glu-Ala-His) box helicase 9.
  
 0.948
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.936
ENSACIP00000029244
Dyskeratosis congenita 1, dyskerin.
  
 
 0.892
ENSACIP00000021298
Splicing factor 1.
   
 0.886
ENSACIP00000019053
RNA binding motif protein 34.
   
 0.878
WDR12
Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.875
ENSACIP00000009452
Uncharacterized protein.
 
 
 
 0.865
ENSACIP00000031500
DEAD (Asp-Glu-Ala-Asp) box helicase 24; Belongs to the DEAD box helicase family.
  
 
0.859
ENSACIP00000000353
RRM domain-containing protein.
   
 0.857
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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