Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000002137PH domain-containing protein. (1049 aa)    
Predicted Functional Partners:
RANBP2
RAN binding protein 2.
  
 0.903
ENSACIP00000001813
NDK domain-containing protein.
   
 
 0.900
ENSACIP00000013344
Cilia and flagella associated protein 410.
    
 
 0.876
ENSACIP00000003133
Uncharacterized protein.
   
 0.854
ENSACIP00000019456
RAB guanine nucleotide exchange factor (GEF) 1, like.
   
 0.854
ENSACIP00000020986
RAB guanine nucleotide exchange factor (GEF) 1.
   
 0.854
ENSACIP00000029324
Uncharacterized protein.
    
 0.846
ENSACIP00000029330
WD_REPEATS_REGION domain-containing protein.
    
 0.846
ENSACIP00000002907
RAB5A, member RAS oncogene family, b.
    
 0.828
ENSACIP00000003727
Uncharacterized protein.
    
 0.828
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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