Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000002148UBA domain containing 1. (423 aa)    
Predicted Functional Partners:
ENSACIP00000003656
Ring finger protein 123.
   
 
 0.992
ENSACIP00000004126
Ribosomal protein S27a.
    
 0.951
ENSACIP00000009888
Ubiquitin specific peptidase 48; Belongs to the peptidase C19 family.
    
   0.894
ENSACIP00000005468
UTP6 small subunit processome component.
    
   0.879
ENSACIP00000013385
ElaC ribonuclease Z 2.
    
   0.866
ENSACIP00000020913
Ubiquitin-like 7b (bone marrow stromal cell-derived).
    
 0.772
ENSACIP00000001299
PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1.
      
 0.732
ENSACIP00000014779
FRA10A associated CGG repeat 1.
      
 0.723
ENSACIP00000031558
UBX domain protein 6.
   
  
 0.719
ENSACIP00000027620
Zinc finger, AN1-type domain 4.
    
 0.718
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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