Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000002204D4, zinc and double PHD fingers, family 3. (377 aa)    
Predicted Functional Partners:
ENSACIP00000025215
AT rich interactive domain 2 (ARID, RFX-like).
    
 0.968
ENSACIP00000005503
Bromodomain containing 7.
    
 0.963
ENSACIP00000016361
Actin-like 6A; Belongs to the actin family.
   
 0.957
ENSACIP00000017444
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2.
   
 0.957
ENSACIP00000012189
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.
   
 0.937
ENSACIP00000014029
Uncharacterized protein.
   
 0.937
ENSACIP00000002283
D4, zinc and double PHD fingers family 1.
  
  
 
0.936
ENSACIP00000013439
AT rich interactive domain 1Aa (SWI-like).
    
 0.936
ENSACIP00000018484
AT rich interactive domain 1Ab (SWI-like).
    
 0.936
ENSACIP00000020836
ARID domain-containing protein.
    
 0.936
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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