Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSACIP00000002397Cleavage stimulation factor, 3' pre-RNA, subunit 1. (335 aa)    
Predicted Functional Partners:
ENSACIP00000016510
Cleavage stimulation factor, 3' pre-RNA, subunit 2.
    
 0.998
ENSACIP00000011979
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.996
ENSACIP00000007039
Uncharacterized protein.
    
 0.995
ENSACIP00000007082
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
    
 0.995
ENSACIP00000016906
BRCT domain-containing protein.
    
 
 0.990
ENSACIP00000012641
Cleavage and polyadenylation specific factor 3.
   
 0.988
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.988
ENSACIP00000001862
FIP1 like 1b (S. cerevisiae).
    
 0.987
ENSACIP00000011857
Cleavage and polyadenylation specific factor 4.
   
 0.985
ENSACIP00000007878
Cleavage and polyadenylation specific factor 1.
   
 0.975
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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