STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000002467Rho GTPase activating protein 39. (1024 aa)    
Predicted Functional Partners:
ENSACIP00000001574
Uncharacterized protein.
    
  0.713
ENSACIP00000024340
Uncharacterized protein.
    
  0.713
ENSACIP00000025055
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.702
ENSACIP00000021236
Ras homolog family member F.
    
  0.686
ENSACIP00000010218
Family with sequence similarity 169 member B.
    
 0.668
ENSACIP00000020816
Si:dkey-21c19.3.
    
  0.651
ENSACIP00000021543
SUMO specific peptidase 2.
    
  0.651
ENSACIP00000002967
Rho GTPase activating protein 1.
     
0.643
CDC42
Cell division cycle 42.
    
 0.639
ENSACIP00000025287
Uncharacterized protein.
    
 0.639
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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