Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000002467Rho GTPase activating protein 39. (1024 aa)    
Predicted Functional Partners:
ENSACIP00000001574
Uncharacterized protein.
    
  0.727
ENSACIP00000024340
Uncharacterized protein.
    
  0.727
CDC42
Cell division cycle 42.
    
 0.635
ENSACIP00000025287
Uncharacterized protein.
    
 0.635
ENSACIP00000015196
Karyopherin (importin) beta 3.
    
 
 0.622
RPL3L
Ribosomal protein L3 like; Belongs to the universal ribosomal protein uL3 family.
    
 0.617
ENSACIP00000013937
Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
 0.617
ENSACIP00000020912
Ca2+-dependent activator protein for secretion b.
      
 0.584
ENSACIP00000017171
Tetraspanin.
      
 0.582
ENSACIP00000009430
Ras homolog gene family, member Gd.
    
 0.573
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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