Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000002833TUB like protein 4b; Belongs to the TUB family. (1777 aa)    
Predicted Functional Partners:
CUL5
Cullin 5; Belongs to the cullin family.
    
  0.864
ENSACIP00000022008
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
  0.864
ENSACIP00000015728
Ring finger protein 7.
    
  0.840
ENSACIP00000012470
Ring-box 1, E3 ubiquitin protein ligase.
    
  0.726
ENSACIP00000008651
Elongin B.
    
  0.723
ENSACIP00000018354
Ubiquitin-like domain-containing protein.
    
  0.723
ENSACIP00000027617
Potassium voltage-gated channel, Isk-related family, member 4.
      
 0.698
ENSACIP00000001060
Elongin C paralog a; Belongs to the SKP1 family.
    
  0.696
ENSACIP00000010391
Serine active site containing 1.
      
 0.643
ENSACIP00000024194
Transmembrane protein 242.
      
 0.641
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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