Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000002873Innate immunity activator a. (565 aa)    
Predicted Functional Partners:
ENSACIP00000012801
Salvador family WW domain containing protein 1.
    
 0.742
ENSACIP00000031627
SAGA complex associated factor 29.
    
   0.708
ENSACIP00000005373
Tax1 (human T-cell leukemia virus type I) binding protein 3.
    
   0.688
ENSACIP00000015127
Dynactin 1b.
    
  0.648
ENSACIP00000019188
Dynactin domain-containing protein.
    
  0.648
ENSACIP00000012517
FERM domain containing 6.
    
 0.646
ENSACIP00000027000
FERM domain-containing protein.
    
 0.646
ENSACIP00000022050
Dynactin 5.
    
   0.596
ENSACIP00000001573
Cytohesin 1b.
    
 
 0.593
ENSACIP00000001903
Cytohesin 1a.
    
 
 0.593
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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