Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000003028Transmembrane protein 117. (520 aa)    
Predicted Functional Partners:
ENSACIP00000020608
Zinc finger CCHC-type and RNA binding motif 1.
      
 0.746
NAALADL2
N-acetylated alpha-linked acidic dipeptidase like 2.
      
 0.742
ENSACIP00000020672
Transmembrane protein 106C.
      
 0.736
ENSACIP00000022150
Kelch repeat and BTB (POZ) domain containing 12.
      
 0.704
ENSACIP00000024192
Transmembrane protein 161B.
      
 0.684
ENSACIP00000025949
CWC22 spliceosome associated protein homolog.
      
 0.655
VPS13B
Vacuolar protein sorting 13 homolog B.
      
 0.638
ENSACIP00000009380
Transmembrane protein 11.
      
 0.636
ENSACIP00000014246
BRISC and BRCA1 A complex member 2.
      
 0.615
ENSACIP00000027744
Uncharacterized protein.
      
 0.613
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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