Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000003089WD repeat domain 66. (920 aa)    
Predicted Functional Partners:
CFAP43
Cilia and flagella associated protein 43.
   
 
 0.969
ENSACIP00000003360
Uncharacterized protein.
   
 0.935
WDR63
WD repeat domain 63.
   
 
 0.935
ENSACIP00000003280
WD repeat domain 78.
   
 
 0.932
ENSACIP00000000666
MYCBP-associated, testis expressed 1.
   
 
 0.921
ENSACIP00000021338
Uncharacterized protein.
   
 
 0.919
ENSACIP00000010915
Cilia and flagella associated protein 52.
   
 0.908
CFAP61
Cilia and flagella associated protein 61.
    
 
 0.887
ENSACIP00000022671
Uncharacterized protein.
   
 0.885
ENSACIP00000002889
Uncharacterized protein.
   
   0.881
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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