Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000003145SUMO specific peptidase 6a. (390 aa)    
Predicted Functional Partners:
ENSACIP00000020439
Pre-mRNA processing factor 19.
   
 
 0.966
ENSACIP00000020907
Small ubiquitin-related modifier.
   
 0.929
ENSACIP00000020816
Si:dkey-21c19.3.
   
 0.928
ENSACIP00000021543
SUMO specific peptidase 2.
   
 0.928
ENSACIP00000001096
Small ubiquitin-related modifier.
   
 0.880
ENSACIP00000005687
Small ubiquitin-related modifier.
   
 0.880
ENSACIP00000011272
Small ubiquitin-related modifier.
   
 0.880
ENSACIP00000020896
Small ubiquitin-related modifier.
   
 0.880
ENSACIP00000002138
ULP_PROTEASE domain-containing protein.
   
 0.850
ENSACIP00000017312
ULP_PROTEASE domain-containing protein.
   
 0.850
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.