Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SUSD2Sushi domain containing 2. (775 aa)    
Predicted Functional Partners:
ENSACIP00000013109
Sushi domain containing 1.
      
 0.638
ENSACIP00000004389
Family with sequence similarity 131 member C.
      
 0.637
ENSACIP00000004650
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
      
 0.610
ENSACIP00000007158
Glutamine and serine rich 1.
      
 0.535
ENSACIP00000007237
Transmembrane p24 trafficking protein 7.
      
 0.519
ENSACIP00000013393
Ureidopropionase, beta.
      
 0.514
ENSACIP00000013357
Guanylyl cyclase domain containing 1.
      
 0.511
ENSACIP00000009071
TSR1 ribosome maturation factor.
      
 0.460
ENSACIP00000016217
Si:ch73-60h1.1.
      
 0.458
ENSACIP00000001781
Glycoprotein (transmembrane) nmb.
      
 0.453
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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