Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ENSACIP00000003176Ubiquitin carboxyl-terminal hydrolase. (437 aa)    
Predicted Functional Partners:
ENSACIP00000016256
Transcriptional adaptor 3 (NGG1 homolog, yeast)-like.
    
 0.886
ENSACIP00000024962
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.883
ENSACIP00000029141
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 0.881
ENSACIP00000010389
Uncharacterized protein.
    
 0.880
ENSACIP00000004126
Ribosomal protein S27a.
    
 0.849
ENSACIP00000031627
SAGA complex associated factor 29.
   
 0.833
ENSACIP00000021798
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.815
ENSACIP00000015794
Transcriptional adapter.
    
 0.797
ENSACIP00000010862
Transcriptional adapter.
    
 0.782
ENSACIP00000004268
Uncharacterized protein.
    
 0.781
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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