Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000003284Collagen, type V, alpha 2a. (1224 aa)    
Predicted Functional Partners:
ENSACIP00000020288
Fibrillar collagen NC1 domain-containing protein.
     
 0.865
ENSACIP00000000005
Collagen, type IX, alpha 3.
  
  
 
0.847
ENSACIP00000000923
Collagen, type I, alpha 2.
   
 
  0.839
ENSACIP00000014416
Fibrillar collagen NC1 domain-containing protein.
     
 0.825
ENSACIP00000003744
Uncharacterized protein.
     
  0.822
ENSACIP00000003921
Procollagen, type IX, alpha 2.
     
  0.822
ENSACIP00000011096
Collagen, type I, alpha 1b.
   
 
  0.775
ENSACIP00000027645
Collagen, type I, alpha 1a.
   
 
  0.775
ENSACIP00000001574
Uncharacterized protein.
    
  0.724
ENSACIP00000024340
Uncharacterized protein.
    
  0.724
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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