Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
YAF2YY1 associated factor 2. (181 aa)    
Predicted Functional Partners:
ENSACIP00000018742
Si:ch211-195d17.2.
   
 0.958
ENSACIP00000015225
Polycomb group ring finger 5a.
    
 0.956
ENSACIP00000024536
Polycomb group ring finger 1.
    
 0.953
ENSACIP00000005951
Ring finger protein 2.
    
 0.946
RING1
Ring finger protein 1.
    
 0.946
ENSACIP00000014062
Polycomb group ring finger 6.
    
 0.942
ENSACIP00000005475
Activator of transcription and developmental regulator AUTS2 a.
    
 0.941
PCGF3
Polycomb group ring finger 3.
    
 0.939
ENSACIP00000015744
Fibrosin.
    
 0.919
ENSACIP00000000756
Bmi1 polycomb ring finger oncogene 1a.
    
 0.917
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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