Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000003442Excision repair cross-complementation group 8. (383 aa)    
Predicted Functional Partners:
ENSACIP00000026665
Damage-specific DNA binding protein 1.
    
 0.999
ENSACIP00000029747
Excision repair cross-complementation group 6.
    
 0.998
ENSACIP00000012470
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.997
ENSACIP00000027701
UV-stimulated scaffold protein A.
    
 0.997
ENSACIP00000029106
COP9 signalosome subunit 5.
   
  0.990
COPS6
COP9 signalosome subunit 6.
    
  0.988
ENSACIP00000025852
COP9 signalosome subunit 2.
    
 0.984
ENSACIP00000026529
COP9 signalosome subunit 3.
    
  0.983
ENSACIP00000017103
Cullin 4B; Belongs to the cullin family.
    
 0.979
ENSACIP00000029255
Cullin 4A; Belongs to the cullin family.
    
 0.979
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.