Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NHLRC3NHL repeat containing 3. (353 aa)    
Predicted Functional Partners:
ENSACIP00000015788
Proline and serine rich 1.
    
 0.883
LHFPL6
LHFPL tetraspan subfamily member 6.
      
 0.636
ENSACIP00000003240
WAP domain-containing protein.
      
 0.585
ENSACIP00000022868
AT rich interactive domain 5A (MRF1-like).
    
 
 0.568
ENSACIP00000001279
Docking protein 6.
      
 0.562
ENSACIP00000010468
Docking protein 4.
      
 0.562
ENSACIP00000016104
Immunoglobin superfamily, member 21a.
    
 0.562
ENSACIP00000017155
Immunoglobin superfamily, member 21b.
    
 0.562
ENSACIP00000004462
FRAS1 related extracellular matrix 2b.
    
 0.557
ENSACIP00000021771
Fras1 related extracellular matrix 3.
    
 0.557
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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