STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000003515Collagen, type XXII, alpha 1. (1309 aa)    
Predicted Functional Partners:
ENSACIP00000001574
Uncharacterized protein.
   
 0.945
ENSACIP00000024340
Uncharacterized protein.
   
 0.945
ENSACIP00000025650
Leucine-rich repeats and guanylate kinase domain containing.
    
 0.896
ENSACIP00000029324
Uncharacterized protein.
   
 0.894
ENSACIP00000029330
WD_REPEATS_REGION domain-containing protein.
   
 0.894
ENSACIP00000017661
Myb-like, SWIRM and MPN domains 1.
    
 0.866
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.858
ENSACIP00000007127
Ig-like domain-containing protein.
    
  0.858
ENSACIP00000016103
DUF4062 domain-containing protein.
    
 0.858
ENSACIP00000005284
Receptor-interacting serine-threonine kinase 4.
   
 0.840
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.