Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRAPPC9Trafficking protein particle complex 9. (1131 aa)    
Predicted Functional Partners:
ENSACIP00000027630
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.997
ENSACIP00000027654
Trafficking protein particle complex 2-like.
    
 0.997
ENSACIP00000001979
Trafficking protein particle complex 8.
   
 0.996
ENSACIP00000029010
Trafficking protein particle complex 10.
   
 0.996
ENSACIP00000003569
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.994
ENSACIP00000023211
Trafficking protein particle complex 2.
    
 0.993
ENSACIP00000029553
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
   
 0.989
ENSACIP00000017459
Uncharacterized protein.
   
 0.978
ENSACIP00000010030
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.975
ENSACIP00000026574
Uncharacterized protein.
    
 0.975
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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