Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000003633Ryanodine receptor 1a (skeletal). (4735 aa)    
Predicted Functional Partners:
ENSACIP00000023082
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 0.896
ENSACIP00000022670
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
   
 0.888
ENSACIP00000024200
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
   
 0.888
ENSACIP00000008669
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
   
 0.882
ENSACIP00000011205
Calsequestrin; Calsequestrin is a high-capacity, moderate affinity, calcium- binding protein and thus acts as an internal calcium store in muscle.
   
 0.882
ENSACIP00000025606
Asp_Arg_Hydrox domain-containing protein.
   
 
 0.876
ENSACIP00000002898
Asp-B-Hydro_N domain-containing protein.
   
 
 0.865
ENSACIP00000006501
Serine/threonine-protein phosphatase.
    
  0.852
ENSACIP00000007411
Serine/threonine-protein phosphatase.
    
  0.852
ENSACIP00000017583
Serine/threonine-protein phosphatase.
    
  0.852
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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