Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
ENSACIP00000003735Basic helix-loop-helix family, member a15. (183 aa)    
Predicted Functional Partners:
ENSACIP00000021569
Ribosomal protein L26.
    
   0.714
ENSACIP00000017901
Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.
    
   0.614
ENSACIP00000000131
Basic helix-loop-helix family, member e41.
    
 0.561
ENSACIP00000031166
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
    
   0.552
ENSACIP00000026217
Lectin, mannose-binding, 1.
      
 0.538
FADS6
Fatty acid desaturase 6.
      
 0.535
ENSACIP00000010385
Zinc finger, CCHC domain containing 9.
    
   0.529
ZNF512B
Zinc finger protein 512B.
    
 
 0.488
ENSACIP00000015690
Zinc finger, AN1-type domain 3.
      
 0.472
ENSACIP00000028238
Uncharacterized protein.
      
 0.472
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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