Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000003744Uncharacterized protein. (271 aa)    
Predicted Functional Partners:
ENSACIP00000003730
Fibrillar collagen NC1 domain-containing protein.
 
   
  0.944
ENSACIP00000003921
Procollagen, type IX, alpha 2.
 
   
  0.936
ENSACIP00000000923
Collagen, type I, alpha 2.
 
   
  0.906
ENSACIP00000027135
Fibrillar collagen NC1 domain-containing protein.
 
   
  0.878
ENSACIP00000011096
Collagen, type I, alpha 1b.
 
   
  0.877
ENSACIP00000014416
Fibrillar collagen NC1 domain-containing protein.
     
 0.863
ENSACIP00000020288
Fibrillar collagen NC1 domain-containing protein.
     
 0.863
ENSACIP00000000005
Collagen, type IX, alpha 3.
     
  0.861
ENSACIP00000010359
Si:dkey-21p1.3.
 
   
  0.848
ENSACIP00000003284
Collagen, type V, alpha 2a.
     
  0.822
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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