STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000003776Obscurin-like 1b. (2130 aa)    
Predicted Functional Partners:
ENSACIP00000002957
WD repeat domain 18.
   
 0.748
ENSACIP00000001574
Uncharacterized protein.
   
 
0.731
ENSACIP00000024340
Uncharacterized protein.
    
 
0.713
ENSACIP00000017175
Testis expressed 10.
   
 0.697
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.683
ENSACIP00000009040
Myosin light chain, phosphorylatable, fast skeletal muscle a.
   
 0.681
ENSACIP00000028208
Myosin, light chain 1, alkali; skeletal, fast.
   
 0.681
ENSACIP00000017288
Calmodulin 3a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 0.669
ENSACIP00000018951
Uncharacterized protein; Belongs to the calmodulin family.
    
 0.669
ENSACIP00000019128
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
 0.669
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.