Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000003906C2 domain-containing protein. (417 aa)    
Predicted Functional Partners:
ENSACIP00000027836
Uncharacterized protein.
    
 0.646
ENSACIP00000010936
Intersectin 2b.
     
 0.511
ENSACIP00000022471
SH3 domain-containing protein.
     
 0.511
ENSACIP00000022500
Uncharacterized protein.
     
 0.511
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.508
ENSACIP00000009497
PDZ domain-containing protein.
     
 0.508
ENSACIP00000020070
Intersectin 1 (SH3 domain protein).
     
 0.476
ENSACIP00000022461
Uncharacterized protein.
     
 0.476
VAMP3
Vesicle associated membrane protein 3.
    
 0.448
ENSACIP00000010646
Si:ch73-234b20.5.
    
 0.448
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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