Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSACIP00000004028Rho GTPase activating protein 21a. (1891 aa)    
Predicted Functional Partners:
ENSACIP00000012607
Uncharacterized protein.
    
 
 0.702
ENSACIP00000025985
Catenin (cadherin-associated protein), beta 1.
   
 
 0.661
ENSACIP00000022662
Coiled-coil domain containing 85A, like.
    
 
 0.657
ENSACIP00000007514
G-rich RNA sequence binding factor 1.
   
  
 0.647
CDC42
Cell division cycle 42.
    
 0.645
ENSACIP00000025287
Uncharacterized protein.
    
 0.645
ENSACIP00000021236
Ras homolog family member F.
    
 0.635
RND1
Rho family GTPase 1.
    
 0.610
ENSACIP00000000610
Rho family GTPase 1b.
    
 0.610
ENSACIP00000024167
Rho family GTPase 3a.
    
 0.610
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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