Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000004050Uncharacterized protein. (487 aa)    
Predicted Functional Partners:
ENSACIP00000004025
Uncharacterized protein.
 
      0.876
ENSACIP00000020927
DH domain-containing protein.
 
   
  0.717
ENSACIP00000019931
Si:ch211-269k10.2.
 
      0.713
NEO1
Neogenin 1.
    
 0.523
ENSACIP00000018732
DCC netrin 1 receptor.
    
 0.523
ENSACIP00000002077
Coiled-coil domain containing 28A.
    
 0.508
ENSACIP00000010936
Intersectin 2b.
    
 0.507
ENSACIP00000022471
SH3 domain-containing protein.
    
 0.507
ENSACIP00000022500
Uncharacterized protein.
    
 0.507
ENSACIP00000020070
Intersectin 1 (SH3 domain protein).
    
 0.488
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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