Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSACIP00000004233Ly1 antibody reactive homolog (mouse). (305 aa)    
Predicted Functional Partners:
ENSACIP00000024638
Ribosomal RNA processing 1.
   
 
 0.971
ENSACIP00000008485
Ribosome production factor 2 homolog.
   
   0.962
ENSACIP00000022274
G-patch domain-containing protein.
   
 
 0.943
ENSACIP00000010171
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 
 0.936
ENSACIP00000003234
PIN2 (TERF1) interacting telomerase inhibitor 1.
   
   0.928
ENSACIP00000028505
IMP U3 small nucleolar ribonucleoprotein 3.
   
   0.924
ENSACIP00000022405
Ribosomal protein, large, P0.
   
   0.918
ENSACIP00000020565
Uncharacterized protein.
   
 
 0.916
ENSACIP00000009485
Peter pan homolog.
   
   0.912
ENSACIP00000009525
Purinergic receptor P2Y11; Belongs to the G-protein coupled receptor 1 family.
   
   0.912
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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