Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000004239Zinc finger GATA like protein 1. (408 aa)    
Predicted Functional Partners:
dis3l2
DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of both mRNAs and miRNAs that have been polyuridylated by a terminal uridylyltransferase. Essential for correct mitosis, and negatively regulates cell proliferation. Belongs to the RNR ribonuclease family. DIS3L2 subfamily.
    
 
 0.756
ENSACIP00000022958
Motile sperm domain containing 2.
      
 0.754
ENSACIP00000030303
Cilia and flagella associated protein 161.
      
 0.754
ENSACIP00000031073
Coiled-coil domain containing 32.
      
 0.738
ENSACIP00000018529
NudC nuclear distribution protein.
      
 0.737
ENSACIP00000020437
CREB binding protein b.
    
 0.723
ENSACIP00000009750
TATA box binding protein.
    
 0.720
ENSACIP00000029690
TATA box binding protein like 2.
    
 0.720
SRF
Serum response factor b.
    
 0.719
ENSACIP00000012433
MADS-box domain-containing protein.
    
 0.719
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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