Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000004245Uncharacterized protein. (61 aa)    
Predicted Functional Partners:
ENSACIP00000013871
Nudix (nucleoside diphosphate linked moiety X)-type motif 3b.
    
   0.889
ENSACIP00000003638
SH3 domain binding glutamate-rich protein like 3.
    
 
 0.804
ENSACIP00000021712
Uncharacterized protein.
    
 
 0.676
GARNL3
GTPase activating Rap/RanGAP domain like 3.
      
 0.636
ENSACIP00000016150
Urotensin 2 domain containing.
      
 0.635
ENSACIP00000017565
RNA binding protein, mRNA processing factor 2b.
      
 0.621
ENSACIP00000006682
Adhesion molecule with Ig-like domain 1.
      
 0.615
ENSACIP00000025571
Uncharacterized protein.
      
 0.615
ENSACIP00000018447
Small nuclear ribonucleoprotein polypeptide A.
    
   0.593
ENSACIP00000023360
Small nuclear ribonucleoprotein polypeptide B2.
    
   0.593
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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