Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
OTOP1Otopetrin 1. (595 aa)    
Predicted Functional Partners:
ENSACIP00000019485
Otolin 1b.
      
 0.749
ENSACIP00000016401
Tectorin alpha.
      
 0.696
ENSACIP00000021806
Otolith matrix protein.
      
 0.694
ENSACIP00000016955
Otolin 1a.
      
 0.684
ENSACIP00000031461
Secreted protein, acidic, cysteine-rich (osteonectin).
      
 0.640
ENSACIP00000004254
Transmembrane protein 107.
      
 0.636
ENSACIP00000016943
Armadillo repeat containing 9.
      
 0.629
ENSACIP00000025647
Solute carrier family 30 member 4.
      
 0.622
ENSACIP00000026050
Raftlin family member 2.
      
 0.596
ENSACIP00000022534
Histidine rich calcium binding protein.
      
 0.549
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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