Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000004372Uncharacterized protein. (300 aa)    
Predicted Functional Partners:
ENSACIP00000005272
Transmembrane and coiled-coil domain family 3.
   
 
 0.684
TMCC3
Transmembrane and coiled-coil domain family 3.
   
 
 0.684
ENSACIP00000007787
HAUS augmin-like complex, subunit 7.
      
 0.597
ENSACIP00000025151
Dual serine/threonine and tyrosine protein kinase.
      
 0.507
APP
Amyloid beta precursor protein.
    
 
 0.487
ENSACIP00000029517
Amyloid beta (A4) precursor protein b.
    
 
 0.487
ENSACIP00000006159
Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b.
      
 0.440
ENSACIP00000012453
Hexosyltransferase.
    
   0.437
ENSACIP00000027363
Hexosyltransferase.
    
   0.437
ENSACIP00000019219
RNA binding motif protein 12B.
      
 0.426
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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