Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000004396Uncharacterized protein. (1326 aa)    
Predicted Functional Partners:
ENSACIP00000028981
Myotilin.
   
  
 0.955
ENSACIP00000028208
Myosin, light chain 1, alkali; skeletal, fast.
   
 
 0.939
ENSACIP00000004649
SH3 domain-containing protein.
 
     0.918
MYOZ1
Myozenin 1.
   
  
 0.907
ENSACIP00000009040
Myosin light chain, phosphorylatable, fast skeletal muscle a.
   
 
 0.903
ENSACIP00000005854
Tropomodulin 4 (muscle).
   
 0.884
ENSACIP00000000914
Tropomodulin 2.
   
 0.875
ENSACIP00000028545
Uncharacterized protein.
     
 0.872
ENSACIP00000028587
Uncharacterized protein.
     
 0.868
ENSACIP00000007534
Tropomodulin 1.
   
 0.849
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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