Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000004401WD repeat domain 20b. (575 aa)    
Predicted Functional Partners:
ENSACIP00000013950
WD repeat domain 48b.
    
 0.964
ENSACIP00000023675
Ubiquitin specific peptidase 12b; Belongs to the peptidase C19 family.
    
 0.880
ENSACIP00000028227
Ubiquitin specific peptidase 12a; Belongs to the peptidase C19 family.
    
 0.880
ENSACIP00000030342
Ubiquitin specific peptidase 46; Belongs to the peptidase C19 family.
    
 0.880
ENSACIP00000030110
Uncharacterized protein.
    
 0.797
ENSACIP00000030174
Uncharacterized protein.
    
 0.797
ENSACIP00000015042
Ubiquitin carboxyl-terminal hydrolase.
    
 0.768
ENSACIP00000004473
Cyclin G associated kinase.
  
  0.754
ENSACIP00000021966
Ubiquitin specific peptidase 38; Belongs to the peptidase C19 family.
    
 0.743
ENSACIP00000028800
Uncharacterized protein.
    
 0.743
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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