Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000004402Synapsin IIa. (460 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.724
ENSACIP00000009497
PDZ domain-containing protein.
   
 
 0.724
ENSACIP00000008892
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.721
ENSACIP00000015438
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.721
ENSACIP00000018337
Synaptotagmin Ia.
   
 0.696
ENSACIP00000000065
Synaptotagmin IIa.
   
 0.682
ENSACIP00000013462
Uncharacterized protein.
   
 0.682
ENSACIP00000023277
Synaptotagmin Vb.
   
 0.682
ENSACIP00000029686
Synaptotagmin Ib.
   
 0.682
ENSACIP00000003306
RAB3C, member RAS oncogene family.
   
 0.681
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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