Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000004407NK3 homeobox 2. (255 aa)    
Predicted Functional Partners:
ENSACIP00000005296
Heart and neural crest derivatives expressed 2.
    
 0.703
ENSACIP00000021875
Transcription factor 21.
    
 0.688
ENSACIP00000021171
Paired box 9.
    
 
 0.670
ENSACIP00000005078
Endothelin 1.
      
 0.616
ENSACIP00000005768
Forkhead box F1.
   
 0.613
ENSACIP00000014471
Forkhead box F2b.
   
 0.613
ENSACIP00000022463
Forkhead box F2a.
   
 0.613
ENSACIP00000012484
T-box transcription factor 1.
    
 0.595
ENSACIP00000006516
Runt-related transcription factor.
   
 0.587
ENSACIP00000026530
Runt-related transcription factor.
   
 0.587
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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