Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSACIP00000004411TLC domain containing 4a. (259 aa)    
Predicted Functional Partners:
ENSACIP00000025650
Leucine-rich repeats and guanylate kinase domain containing.
    
 
 0.736
ENSACIP00000023986
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 
 0.610
ENSACIP00000016774
Nocturnin a.
    
 
 0.579
ENSACIP00000014426
Pumilio RNA-binding family member 2.
    
   0.554
ENSACIP00000027154
Pumilio RNA-binding family member 1.
    
   0.554
ENSACIP00000007235
Si:dkey-69o16.5.
      
 0.485
ENSACIP00000017264
Nuclear receptor interacting protein 2.
      
 0.469
ENSACIP00000000621
SET binding factor 2.
      
 0.465
ENSACIP00000031653
SET binding factor 1.
      
 0.465
ENSACIP00000025712
Serine/threonine-protein kinase RIO3; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.
      
 0.463
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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