Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000004422Si:ch1073-75f15.2. (131 aa)    
Predicted Functional Partners:
ENSACIP00000002845
ANK_REP_REGION domain-containing protein.
   
 
 0.986
ENSACIP00000002959
Meiosis-specific, MEI4 homolog (S. cerevisiae).
    
 
 0.972
ENSACIP00000001067
X-ray repair complementing defective repair in Chinese hamster cells 1.
   
 0.964
ENSACIP00000017671
DNA ligase.
   
 0.956
ENSACIP00000024543
Fucose kinase.
  
 
 0.938
ENSACIP00000007496
Transcription termination factor, RNA polymerase II.
  
 
 0.936
ENSACIP00000002514
Aprataxin.
    
 0.910
NEK9
NIMA related kinase 9.
      
 0.881
ENSACIP00000010406
X-ray repair complementing defective repair in Chinese hamster cells 4.
    
 
 0.874
ENSACIP00000008787
Polymerase (DNA directed), lambda; Belongs to the DNA polymerase type-X family.
    
 0.866
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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