Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000004522UBX domain protein 4. (131 aa)    
Predicted Functional Partners:
ENSACIP00000031558
UBX domain protein 6.
    
 0.994
ENSACIP00000018597
Zgc:136908.
   
 0.987
ENSACIP00000026468
Valosin containing protein; Belongs to the AAA ATPase family.
   
 0.987
ENSACIP00000028670
UBX domain protein 1.
     
 0.948
ENSACIP00000015517
NSFL1 (p97) cofactor (p47).
    
 0.939
ENSACIP00000006217
UBX domain protein 2A.
    
 0.929
ENSACIP00000003115
Ubiquitination factor E4A (UFD2 homolog, yeast).
    
 
 0.923
SPATA5
Spermatogenesis associated 5.
   
 0.914
ENSACIP00000025718
Spermatogenesis associated 5-like 1.
   
 0.914
ENSACIP00000011099
ASPSCR1 tether for SLC2A4, UBX domain containing.
    
 0.905
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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