Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ENSACIP00000004561AlkB homolog 8, tRNA methyltransferase. (670 aa)    
Predicted Functional Partners:
ENSACIP00000029209
tRNA methyltransferase subunit 11-2.
   
 
 0.961
ENSACIP00000000235
AlkB homolog 1, histone H2A dioxygenase.
      
 0.824
ENSACIP00000021488
AlkB homolog 2, alpha-ketoglutarate-dependent dioxygenase.
      
 0.821
ENSACIP00000005144
FTO alpha-ketoglutarate dependent dioxygenase.
     
 0.761
ENSACIP00000019016
BUD23 rRNA methyltransferase and ribosome maturation factor.
      
 0.749
ENSACIP00000004615
Kelch repeat and BTB (POZ) domain containing 3.
      
 0.740
ENSACIP00000008039
AlkB homolog 7.
      
 0.736
ENSACIP00000012199
Gamma-aminobutyric acid (GABA) A receptor, alpha 6b; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.735
ENSACIP00000003909
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
      
 0.729
ENSACIP00000017329
Ubiquinol-cytochrome c reductase core protein 1.
   
  
 0.728
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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