Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ENSACIP00000004602Adenosine deaminase RNA specific B2 (inactive). (707 aa)    
Predicted Functional Partners:
HNRNPA1P48
Heterogeneous nuclear ribonucleoprotein A1 pseudogene 48.
    
 
 0.767
ENSACIP00000008099
Aly/REF export factor.
      
 0.735
ENSACIP00000004263
Purine-rich element binding protein Aa.
      
 0.689
TARBP2
RISC-loading complex subunit TARBP2; Required for formation of the RNA induced silencing complex (RISC). Component of the RISC loading complex (RLC), also known as the micro-RNA (miRNA) loading complex (miRLC), which is composed of DICER1, AGO2 and TARBP2. Within the RLC/miRLC, DICER1 and TARBP2 are required to process precursor miRNAs (pre-miRNAs) to mature miRNAs and then load them onto AGO2. AGO2 bound to the mature miRNA constitutes the minimal RISC and may subsequently dissociate from DICER1 and TARBP2. May also play a role in the production of short interfering RNAs (siRNAs) from [...]
    
 0.676
ENSACIP00000026006
Protein kinase, interferon-inducible double stranded RNA dependent activator.
    
 0.676
ENSACIP00000014685
C2H2-type domain-containing protein.
      
 0.637
ENSACIP00000001006
Staufen double-stranded RNA binding protein 2.
  
 
 0.636
ENSACIP00000014078
Zgc:100846.
      
 0.620
ENSACIP00000017572
NFKB repressing factor.
    
   0.598
ENSACIP00000006750
Spermatid perinuclear RNA binding protein.
    
 
 0.591
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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