Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000004641WD repeat domain 37. (454 aa)    
Predicted Functional Partners:
ENSACIP00000015459
Phosphofurin acidic cluster sorting protein 2.
    
 
 0.949
PACS1
Phosphofurin acidic cluster sorting protein 1a.
    
 
 0.888
ENSACIP00000007218
Uncharacterized protein.
    
 
 0.848
ENSACIP00000007280
Uncharacterized protein.
    
 
 0.848
ENSACIP00000023827
Uncharacterized protein.
    
 
 0.848
ENSACIP00000023877
Uncharacterized protein.
    
 
 0.848
WDR63
WD repeat domain 63.
    
 0.764
ENSACIP00000003280
WD repeat domain 78.
    
 0.762
ENSACIP00000031627
SAGA complex associated factor 29.
    
 0.762
ENSACIP00000013950
WD repeat domain 48b.
    
 0.730
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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