PDCL3 protein (Amphilophus citrinellus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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[Homology]

Score

PDCL3

Phosducin like 3. (220 aa)

Predicted Functional Partners:

ENSACIP00000011959

0.949

ENSACIP00000025190

0.949

ENSACIP00000009209

0.947

ENSACIP00000013110

0.947

ENSACIP00000023898

0.944

ENSACIP00000001186

0.937

ENSACIP00000001887

0.934

ENSACIP00000002102

0.923

ENSACIP00000025326

0.903

ENSACIP00000011371

0.900

Your Current Organism:

Amphilophus citrinellus

NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACIP00000001186	ENSACIP00000001887	ENSACIP00000001186	ENSACIP00000001887	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Chaperonin containing TCP1, subunit 8 (theta).	0.999
ENSACIP00000001186	ENSACIP00000002102	ENSACIP00000001186	ENSACIP00000002102	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Chaperonin containing TCP1, subunit 5 (epsilon).	0.999
ENSACIP00000001186	ENSACIP00000009209	ENSACIP00000001186	ENSACIP00000009209	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	T-complex protein 1 subunit gamma.	0.999
ENSACIP00000001186	ENSACIP00000011371	ENSACIP00000001186	ENSACIP00000011371	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Peroxisomal biogenesis factor 7.	0.752
ENSACIP00000001186	ENSACIP00000011959	ENSACIP00000001186	ENSACIP00000011959	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	T-complex 1.	0.999
ENSACIP00000001186	ENSACIP00000013110	ENSACIP00000001186	ENSACIP00000013110	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	T-complex protein 1 subunit delta.	0.999
ENSACIP00000001186	ENSACIP00000023898	ENSACIP00000001186	ENSACIP00000023898	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Chaperonin containing TCP1, subunit 2 (beta).	0.999
ENSACIP00000001186	ENSACIP00000025190	ENSACIP00000001186	ENSACIP00000025190	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Chaperonin containing TCP1, subunit 6A (zeta 1); Belongs to the chaperonin (HSP60) family.	0.999
ENSACIP00000001186	ENSACIP00000025326	ENSACIP00000001186	ENSACIP00000025326	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	F-box and WD repeat domain containing 4.	0.951
ENSACIP00000001186	PDCL3	ENSACIP00000001186	ENSACIP00000004801	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Phosducin like 3.	0.937
ENSACIP00000001887	ENSACIP00000001186	ENSACIP00000001887	ENSACIP00000001186	Chaperonin containing TCP1, subunit 8 (theta).	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.999
ENSACIP00000001887	ENSACIP00000002102	ENSACIP00000001887	ENSACIP00000002102	Chaperonin containing TCP1, subunit 8 (theta).	Chaperonin containing TCP1, subunit 5 (epsilon).	0.999
ENSACIP00000001887	ENSACIP00000009209	ENSACIP00000001887	ENSACIP00000009209	Chaperonin containing TCP1, subunit 8 (theta).	T-complex protein 1 subunit gamma.	0.999
ENSACIP00000001887	ENSACIP00000011371	ENSACIP00000001887	ENSACIP00000011371	Chaperonin containing TCP1, subunit 8 (theta).	Peroxisomal biogenesis factor 7.	0.801
ENSACIP00000001887	ENSACIP00000011959	ENSACIP00000001887	ENSACIP00000011959	Chaperonin containing TCP1, subunit 8 (theta).	T-complex 1.	0.999
ENSACIP00000001887	ENSACIP00000013110	ENSACIP00000001887	ENSACIP00000013110	Chaperonin containing TCP1, subunit 8 (theta).	T-complex protein 1 subunit delta.	0.999
ENSACIP00000001887	ENSACIP00000023898	ENSACIP00000001887	ENSACIP00000023898	Chaperonin containing TCP1, subunit 8 (theta).	Chaperonin containing TCP1, subunit 2 (beta).	0.999
ENSACIP00000001887	ENSACIP00000025190	ENSACIP00000001887	ENSACIP00000025190	Chaperonin containing TCP1, subunit 8 (theta).	Chaperonin containing TCP1, subunit 6A (zeta 1); Belongs to the chaperonin (HSP60) family.	0.998
ENSACIP00000001887	ENSACIP00000025326	ENSACIP00000001887	ENSACIP00000025326	Chaperonin containing TCP1, subunit 8 (theta).	F-box and WD repeat domain containing 4.	0.911
ENSACIP00000001887	PDCL3	ENSACIP00000001887	ENSACIP00000004801	Chaperonin containing TCP1, subunit 8 (theta).	Phosducin like 3.	0.934

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