STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000004841Nucleoporin 210. (1802 aa)    
Predicted Functional Partners:
ENSACIP00000024242
Nucleoporin 155.
   
 0.998
ENSACIP00000005740
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.997
ENSACIP00000006550
Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.
    
 0.997
ENSACIP00000017430
Nucleoporin 98.
   
 0.997
ENSACIP00000030743
Nucleoporin 43.
    
 0.997
ENSACIP00000031025
Nucleoporin 35.
    
 0.997
ENSACIP00000031116
Nucleoporin 88.
    
 0.997
ENSACIP00000006282
SEH1-like (S. cerevisiae); Belongs to the WD repeat SEC13 family.
   
 0.996
ENSACIP00000000040
Achalasia, adrenocortical insufficiency, alacrimia.
    
 0.995
ENSACIP00000010941
NDC1 transmembrane nucleoporin.
   
 0.995
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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