Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000004844RING-type domain-containing protein. (267 aa)    
Predicted Functional Partners:
ENSACIP00000010442
Si:ch1073-440b2.1.
 
      0.759
ENSACIP00000017182
Tumor protein p53 binding protein, 1.
    
 0.740
ENSACIP00000022928
Ubiquitin-conjugating enzyme E2Nb; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.723
ENSACIP00000010389
Uncharacterized protein.
    
  0.649
ENSACIP00000004126
Ribosomal protein S27a.
   
  0.630
ENSACIP00000018374
Alpha-(1,6)-fucosyltransferase; Catalyzes the addition of fucose in alpha 1-6 linkage to the first GlcNAc residue, next to the peptide chains in N-glycans. Belongs to the glycosyltransferase 23 family.
     
 0.589
ENSACIP00000009037
PAX interacting (with transcription-activation domain) protein 1.
    
 0.588
ENSACIP00000017535
Uncharacterized protein.
    
 0.588
ENSACIP00000016906
BRCT domain-containing protein.
    
 0.583
ENSACIP00000014474
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.572
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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