Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000004863Leucine rich repeat containing 73. (310 aa)    
Predicted Functional Partners:
ENSACIP00000002118
TBC1 domain family, member 5.
    
   0.893
ENSACIP00000008689
VPS26, retromer complex component A.
    
 
 0.835
ENSACIP00000008957
Ankyrin repeat domain 13 family, member D.
      
 0.833
ENSACIP00000009193
VPS26, retromer complex component B.
    
 
 0.813
ENSACIP00000022805
Uncharacterized protein.
    
 
 0.813
ENSACIP00000002326
TEPSIN adaptor related protein complex 4 accessory protein.
      
 0.805
ENSACIP00000030872
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
   0.798
ENSACIP00000027570
Uncharacterized protein.
      
 0.759
ENSACIP00000012999
Polymerase (RNA) III (DNA directed) polypeptide H.
      
 0.742
ENSACIP00000025474
Expressed sequence BC139872.
      
 0.638
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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