Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000005035Chromobox homolog 6a. (450 aa)    
Predicted Functional Partners:
ENSACIP00000025767
Chromo domain-containing protein.
    
0.983
ENSACIP00000027662
Chromo domain-containing protein.
    
0.983
ENSACIP00000005951
Ring finger protein 2.
    
 0.973
RING1
Ring finger protein 1.
    
 0.973
ENSACIP00000000756
Bmi1 polycomb ring finger oncogene 1a.
    
 0.970
PCGF2
Polycomb group ring finger 2.
    
 0.970
ENSACIP00000013857
Chromobox homolog 2 (Drosophila Pc class).
    
0.966
CBX2
Chromobox 2.
    
0.966
PCGF3
Polycomb group ring finger 3.
    
 0.941
ENSACIP00000003437
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
    
 0.925
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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