Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSACIP00000005083Small nuclear RNA activating complex, polypeptide 5. (123 aa)    
Predicted Functional Partners:
ENSACIP00000013386
Uncharacterized protein.
    
 0.998
ENSACIP00000025707
Uncharacterized protein.
    
 0.994
ENSACIP00000000515
Uncharacterized protein.
    
 0.989
ENSACIP00000028596
Small nuclear RNA activating complex, polypeptide 1b.
    
 0.989
ENSACIP00000024310
Uncharacterized protein.
    
 0.982
ENSACIP00000024319
Uncharacterized protein.
    
 0.982
ENSACIP00000017693
General transcription factor IIA, 1.
    
  0.921
ENSACIP00000020062
TFIIB-type domain-containing protein.
    
 0.915
ENSACIP00000027919
General transcription factor IIB.
    
 0.915
ENSACIP00000007010
Polymerase (RNA) II (DNA directed) polypeptide L.
   
  0.914
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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