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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACIP00000005083Small nuclear RNA activating complex, polypeptide 5. (123 aa)    
Predicted Functional Partners:
ENSACIP00000013386
Uncharacterized protein.
    
 0.983
ENSACIP00000000515
Uncharacterized protein.
    
 0.975
ENSACIP00000028596
Small nuclear RNA activating complex, polypeptide 1b.
    
 0.975
ENSACIP00000020062
TFIIB-type domain-containing protein.
    
 0.936
ENSACIP00000027919
General transcription factor IIB.
    
 0.936
ENSACIP00000024310
Uncharacterized protein.
    
 0.930
ENSACIP00000024319
Uncharacterized protein.
    
 0.930
ENSACIP00000017693
General transcription factor IIA, 1.
    
  0.903
ENSACIP00000030271
General transcription factor IIA, 2.
    
  0.903
ENSACIP00000009750
TATA box binding protein.
    
 0.869
Your Current Organism:
Amphilophus citrinellus
NCBI taxonomy Id: 61819
Other names: A. citrinellus, Archocentrus citrinellum, Cichlasoma citrinellum, Herichthys citrinellus, Heros citrinellus, Midas cichlid, red devil, red devil cichlid
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.